Skip to content
  • Search
Skins
  • Light
  • Cerulean
  • Cosmo
  • Flatly
  • Journal
  • Litera
  • Lumen
  • Lux
  • Materia
  • Minty
  • Morph
  • Pulse
  • Sandstone
  • Simplex
  • Sketchy
  • Spacelab
  • United
  • Yeti
  • Zephyr
  • Dark
  • Cyborg
  • Darkly
  • Quartz
  • Slate
  • Solar
  • Superhero
  • Vapor

  • Default (No Skin)
  • No Skin
Collapse

ZMT zurich med tech

  1. Home
  2. Sim4Life
  3. Anatomical Models
  4. planar cut

planar cut

Scheduled Pinned Locked Moved Anatomical Models
7 Posts 3 Posters 775 Views
  • Oldest to Newest
  • Newest to Oldest
  • Most Votes
Reply
  • Reply as topic
Log in to reply
This topic has been deleted. Only users with topic management privileges can see it.
  • H Offline
    H Offline
    hiTina
    wrote on last edited by
    #1

    hello, I need some help. I want to select only the head of the rat as the stimulation area. how can I cut away parts of a model object by the planar cut?
    捕获.PNG
    best wishes.

    1 Reply Last reply
    0
    • brynB Offline
      brynB Offline
      bryn
      ZMT
      wrote on last edited by bryn
      #2

      looks like this is the big male rat. it is quite heavy (large number of triangles) and uses the old poser, with extra bone entities (cylinders) for posing, which you probably don't care about.

      I would do the following:

      • right click on bone system: select Clone As Static from context menu
      • remove any cylinders in the Static model
      • select all surfaces (in the Static model)
      • start Mesh Tools -> Mesh Doctor, press Make Manifold
      • start Modify -> Planar Cut, click somewhere on the rat
      • if the transform widget does not snap to where you clicked: Goto preferences and Enable Triangle Mesh Picking for Anatomical Models
      • Choose cut and press Cut
      • Inspect the cut surface: the cut surface should be closed/covered. You should not be able to see inside.
      • If a cut failed select the tissue surface, start the Planar Cut Edit tool and move the cut slightly. This can fix the issue.
      brynB 1 Reply Last reply
      0
      • brynB bryn

        looks like this is the big male rat. it is quite heavy (large number of triangles) and uses the old poser, with extra bone entities (cylinders) for posing, which you probably don't care about.

        I would do the following:

        • right click on bone system: select Clone As Static from context menu
        • remove any cylinders in the Static model
        • select all surfaces (in the Static model)
        • start Mesh Tools -> Mesh Doctor, press Make Manifold
        • start Modify -> Planar Cut, click somewhere on the rat
        • if the transform widget does not snap to where you clicked: Goto preferences and Enable Triangle Mesh Picking for Anatomical Models
        • Choose cut and press Cut
        • Inspect the cut surface: the cut surface should be closed/covered. You should not be able to see inside.
        • If a cut failed select the tissue surface, start the Planar Cut Edit tool and move the cut slightly. This can fix the issue.
        brynB Offline
        brynB Offline
        bryn
        ZMT
        wrote on last edited by
        #3

        @hiTina b9f9ff29-cc28-43d2-8667-46c444be167c-chop_head_bigmalerat.gif

        H 1 Reply Last reply
        0
        • brynB bryn

          @hiTina b9f9ff29-cc28-43d2-8667-46c444be167c-chop_head_bigmalerat.gif

          H Offline
          H Offline
          hiTina
          wrote on last edited by
          #4

          @bryn okay,I have tried successfully. Thank you very much. You are so warm-heated.
          well,you say :remove any cylinders in the Static model and select all surfaces (in the Static model). I want yo know what the cylinders is ,could you show me some example of cylinders?

          1 Reply Last reply
          0
          • brynB Offline
            brynB Offline
            bryn
            ZMT
            wrote on last edited by
            #5

            @hiTina sorry for adding the confusing comment about the "cylinders". I should have checked if the big male rat actually has those. I just loaded it and see it does not have those legacy cylinder bones (with german names) - I must have confused it with a different model.

            H 1 Reply Last reply
            0
            • brynB bryn

              @hiTina sorry for adding the confusing comment about the "cylinders". I should have checked if the big male rat actually has those. I just loaded it and see it does not have those legacy cylinder bones (with german names) - I must have confused it with a different model.

              H Offline
              H Offline
              hiTina
              wrote on last edited by
              #6

              @bryn okay,It doesn't matter. Thanks for your answer and your help .Best wishes.

              1 Reply Last reply
              0
              • M Offline
                M Offline
                montanaro
                wrote on last edited by
                #7

                Note also you don't actually need to cut anything, you can just limit your simulation domain in the grid section of the simulation (either create a wireframe of the area of interest and then drag that into the simulation grid and get rid of the mouse in the simulation grid; or you can use negative padding in the grid section of the simulation until you get to your area of interest). This won't really help with simulations that use meshes, only with regular grid / voxel type simulations

                1 Reply Last reply
                0
                Reply
                • Reply as topic
                Log in to reply
                • Oldest to Newest
                • Newest to Oldest
                • Most Votes


                • Login

                • Don't have an account? Register

                • Login or register to search.
                • First post
                  Last post
                0
                • Search